Single -cell Recognition of cell types

Important note: the SingeR browseR has been upgraded. It now uses a new SingleR object. Please refer to https://github.com/dviraran/SingleR for more information.
To analyze single-cell data sets choose an item from the table and/or upload SingleR objects.
If you would like to add a dataset to this list please contact dvir.aran@ucsf.edu.

                  

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Use shift to select multiple cells in the scatter plot to show in the heatmap.





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Differential expression (DE) analysis between two sets. Choose multiple clusters/cell types in 'Set 1' and 'Set 2' and run a DE analysis between those sets. You may also leave both Set 2 empty to retrieve top markers differentiating Set 1 with all other cells.

Set 1


                    

Set 2


                    
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