UCSF Bakar Computational Health Sciences Institute

Computational Health Applications

preterm_transcriptomics

Ishan Paranjpe Preterm Birth Transcriptomic Data Visualization application

singler

Aran Dvir SingleR application

cgt

Benjamin Glicksberg CGT application

hallmarks

Albert Yu

10kimmunomes

Kelly Zalocusky 10kimmunomes application

ptb_gwas

Nadav Rappoport Preterm Birth GWAS Data Visualization application

cidehr

Thomas Peterson CIDEHR application

xcell

Dvir Aran XCELL application

tcga-110

Katharine Yu A comprehensive transcriptomic analysis of cell lines

sle_clustering

Ishan Paranjpe SLE Integrative Clustering application

ptb_microbiome_metaanalysis

Idit Kosti Meta-Analysis of Vaginal Microbiome Data Provides New Insights into Preterm Birth

xcellview

Dvir Aran xCellView - visualize cell types enrichments (beta version)

buttelabcovid

ButteLab COVID Tracker application

harmonyrna

Matthew Elliott Harmony RNA

alz_sex_specific_expression

Sex-Specific Cross Tissue Meta-Analysis Identifies Immune Dysregulation in Women with Alzheimer's Disease

testapp

testapp for image testing